Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMEMQLMAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKNPLLSSAEIIVSSAVTRALETASYVVCATGLPLRVEPLLHEWQVY-KTGIE--NFET----ARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYRE---HQTVVVVAHRMLMRQFVPN-----------EKIDFCQVIECELEI
4IJ5 Chain:A ((1-185))--------------------MVKLILVRHAESEWNPVG--RYQGL--LDPDLSERGKKQAKLLAQELSREHLDVIYSSPLKRTYLTALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVE---EPHKVEFQGGESLASVYNRVKGFLEEVRKRHWNQTVVVVSHTVPMRAMYCALLGVDLSKFWSFGCDNASYSVIHME-


General information:
TITO was launched using:
RESULT:

Template: 4IJ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 811 -52166 -64.32 -318.09
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -64.32
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_4IJ5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IJ5-query.scw
PDB file : Tito_Scwrl_4IJ5.pdb: