Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRTEYLTQLELYLKKLPEADRIEAMDYFRE-LFDDAGIEGEEELIASLGTPKEAAHEVL---SNLLDKKINEAPAQKNNRQILHIALLA-LLAAPIGIPLGIAILVTLFAI---LVAALTVILAFFAVSILGIIGGFLFLVESFTVLAQAKSAFILIFGSGLLAIGASSLVLLGISYVARFFGLLIVRLVQFVLKKGKRGNQHA
5XAM Chain:A ((210-319))--------------------DQIQSVATINQRLFRDIQISGN-------FTPEEASQLALVLKSGALPIKIVTAAERSIGPSLGADAIRSGAIAALVGIGLVFVMLFAYYGLWFGLVGALG--LLFSSIIILGILGGF-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5XAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 92 -9545 -103.75 -94.50
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -103.75
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_5XAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5XAM-query.scw
PDB file : Tito_Scwrl_5XAM.pdb: