Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPFSTQLAQKIGLEHLFTYSLFFLTIGSLIRL-IN-LPLLYLGTLMVGASVAVINVLLPSLIQANQP-KKIGFLTTLYVTSMGIATALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRL-APQ----TKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTVMTWLPTMSIH-AGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVIGISMLFF-P---INNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPSVAALLLIDILMTVALFTVDRADKIL
4ZP0 Chain:A ((4-368))-GRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRT-VRS-LIIMGG-WPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLV-RLTLFA-SDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGG------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1703 -218829 -128.50 -621.67
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -128.50
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_4ZP0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZP0-query.scw
PDB file : Tito_Scwrl_4ZP0.pdb: