Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLN-ENKSRSGLTG-GDAAKLDHYIENG-----KTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKL-DLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIE-SKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
4RQO Chain:B ((190-473))PFATATELLKLCK-KHHLTIAELMLVNEKT--WRSTAEIHKGILDIAKVMDDCINNGCKHDGVLPGGLNLKRRAPDLYRKLIEQKGVKSVFEQSDIMNHLNLYAMAVNEENAAGGRIVTAPTNGAAGIIPAVLKYCQQAHDRMSNEDIYTYFLTAAAIGILYKK----SGAEVGCQGEVGVASSMAAAGLTAVLGGTIEQVENAAEIAMEHHLGMTCDPVLGLVQIPCIERNAMGAVKAVNATRMALIGDGQHQISLDKVIKTMKQTGMDMQSIYKETSMGGLAVNL------------


General information:
TITO was launched using:
RESULT:

Template: 4RQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1458 -70358 -48.26 -259.62
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -48.26
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_4RQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RQO-query.scw
PDB file : Tito_Scwrl_4RQO.pdb: