Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYSFTKGAIILSGGSIMKKKPIYLWVLLILSALISVPSLFGIVSPLPSKEALRAAQKQVAGVNAQQLEDQLNYTYRVAEASHSIFNVALIVLSTILVV-VA-IVFLVRKNLQYANYTYVGYVLLAIIGSIYGYVGLQDA-VQLVQDESMRLTVSI-GSKAVSIFYIVINVLFLALVFYKMWRQQKALAEEEETEELT-
5TPM Chain:A ((1-155))-----------SNADLLETRHALEGIAAYYAALRSTDEDKERIREL--HHAIELAQQS--GDLDAESNAVLQYQIAVTEAAHN------VVLLHLLRCMEPMLAQNVRQNFELL-YS-------------------RREMLPLVSSHRTRIFEAIMAGK--PEEAREASHRHLAFIEEILLDRSREESRRERSLRRLE


General information:
TITO was launched using:
RESULT:

Template: 5TPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 556 -24838 -44.67 -165.59
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -44.67
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_5TPM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TPM-query.scw
PDB file : Tito_Scwrl_5TPM.pdb: