Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLNEVKEFVKELRGLSQEELAKRENELKKELFELRFQAATGQLEQTARLKEVKKQIARIKTVQSEAK
5GAF Chain:Z ((2-61))--------KAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKA


General information:
TITO was launched using:
RESULT:

Template: 5GAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Z - contact count / total energy / energy per contact / energy per residue : 117 -9382 -80.18 -156.36
target 2D structure prediction score : 0.88
Monomeric hydrophicity matching model chain Z : 0.76

3D Compatibility (PKB) : -80.18
2D Compatibility (Sec. Struct. Predict.) : 0.88
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.773

(partial model without unconserved sides chains):
PDB file : Tito_5GAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAF-query.scw
PDB file : Tito_Scwrl_5GAF.pdb: