Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV
5O5J Chain:K ((23-137))-----------KNVPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGCRPPKRRR-


General information:
TITO was launched using:
RESULT:

Template: 5O5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 546 -33104 -60.63 -287.86
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain K : 0.91

3D Compatibility (PKB) : -60.63
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.724

(partial model without unconserved sides chains):
PDB file : Tito_5O5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5O5J-query.scw
PDB file : Tito_Scwrl_5O5J.pdb: