Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------MTWFE--EIFEEYKFEKGEGQCPRLLCFLVASFVKRVIIDCRIKGGIYERDSRIIY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4ZLA Chain:A ((7-502))MLKIKLEKTTFENAKAECSLVFIINKDFSHAWVKNKELLETFKYE-GEG----------------VFLD---------QENKILYAGVKEDDVHLLRESACLAVRTLKKLAFKSVKVGVYTCGAHNALLENLKALFLGLKLGLYEYDTFKSNKKESVLKEAIVALELHKSLEKSAKEALKYAEIMTESLNIVKDLVNTPPMIGTPVYMAEVAQKVAKENHLEIHVHDEKFLEEKKMNAFLAVNKASLSVNPPRLIHLVYKPKKAKKKIALVGKGLTYDCGGLSLKPADYMVTMKADKGGGSAVIGLLNALAKLGVEAEVHGIIGATENMIGPAAYKPDDILISKEGKSIEVRNTDAEGRLVLADCLSYAQDLNPDVIVDFATLTGACVVGLGEFTSAIMGHNEELKNLFETSGLESGELLAKLPFNRHLKKLIESKIADVCNISSSRYGGAITAGLFLNEFIRDEFKDKWLHIDIAGPAYVEKEWDVNSFGASGAGVRACTAFVEELLKKA


General information:
TITO was launched using:
RESULT:

Template: 4ZLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 15 2058 137.17 73.48
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 137.17
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.727

(partial model without unconserved sides chains):
PDB file : Tito_4ZLA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZLA-query.scw
PDB file : Tito_Scwrl_4ZLA.pdb: