Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKFKIFLFIEACLLTGALILMVSEHFSRFLLILFLFLLLIRYYTGKEGNNLLLVAATILFFFIVMLNPFVILAIFVAVIYSLFLLYPMMNQEKEQTNLVFEEVVTVKKEKNRWFGNLHHFSSYQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILRKIVGTTKIIVPVDVEVSLSVNCLYGDLTFFNQPKRALRNEHYHQETKDYLKSNKSVKIFLTTMIGDVEVVRG
4QRK Chain:A ((119-220))---------------------------------------------------------------------------------------------------------------------------SKIN-LKELNVGMGVGKVDLDISGNY--KNNVKVNIEGGVGEATVYLPKSIGVKIKAEKGVGAVNANGFI-VE---GENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK


General information:
TITO was launched using:
RESULT:

Template: 4QRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 563 -49491 -87.90 -485.20
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -87.90
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_4QRK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QRK-query.scw
PDB file : Tito_Scwrl_4QRK.pdb: