Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLATLLLLSTVALAGCSSVQRSLRGDDYVDSSLAAEESSKVAAQSAKELNDALTNENANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLAVENFLTHAKEGYYNGITFHRVIDGFMVQTGDPKGDGTGGQSIWHDKDKTKDKGTGFKNEITPYL-YNIRGALAMANTGQPNTNGSQFFINQNSTDTSSKLPTSKYPQKIIEAYKEGGNPSLDGKHPVFGQVIGGMDVVDKIAKAEKDE-KDKPTTAITIDSIEVVKDYDFKS
1ZKC Chain:A ((17-177))----------------------------------------------------------------------RGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWG---------KPFKDEFRPNLSHTGRGILSMANSG-PNSNRSQFFITFR----------------------S--CAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDP----


General information:
TITO was launched using:
RESULT:

Template: 1ZKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 829 -17848 -21.53 -112.25
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -21.53
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.669

(partial model without unconserved sides chains):
PDB file : Tito_1ZKC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZKC-query.scw
PDB file : Tito_Scwrl_1ZKC.pdb: