Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGFIGLGNMGASLAKSVLQTR--TSDEILLANRSQ-AKVDAFIADFGGQASSNEEMFAEADVIFLGVKPAQFSELLSQYQTILEKRESLLLISMAAGLTLEKLASLIPSQHRIIRMMPNTPASIGQGVISYALSPNCRTEDSELFCQLLSKAGLLVELGESLINAATGLAGCGPAFVYLFIEALADAGVQTGLPRETALKMAAQTVVGAGQLVLESQQHPGVLKDQVCSPGGSTIAGVASLEAHAFRGIVMEAVHQAYKRTQELGK
5BSE Chain:I ((16-276))--LGFIGAGKMAESIAKGAVRSGVLSPSRIKTAIHSNPARRTAFESIGITVLSSNDDVVRDSNVVVFSVKPQLLKDVVLKLKPLLTKDK--LLVSVAAGIKMKDLQEW-AGHERFIRVMPNTAATVGEAASVMSLGGAATEEDANLISQLFGSIGKIWKADDKYFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTVLGAASMATQSGKHPGQLKDDVTSPGGTTIAGVHELEKAGFRGILMNAVVAAAKRSQEL--


General information:
TITO was launched using:
RESULT:

Template: 5BSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1120 -40935 -36.55 -158.66
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain I : 0.86

3D Compatibility (PKB) : -36.55
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_5BSE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BSE-query.scw
PDB file : Tito_Scwrl_5BSE.pdb: