Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MRSGRDKKIAGVCAGVAHYLDM---------DPTIVRVIWGVLTC-----------CYGAGIVAYIILWIIAPVATDY---
2M4E Chain:A ((1-86))MSKTAKLNNEEKLVKKALEIGGKMAKMQGFDLPQSPQPVRVKAVYLFLVDAKQIAPLPDSKLDGANIKHRLALWIHAALPDNDPLK


General information:
TITO was launched using:
RESULT:

Template: 2M4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 107 -6762 -63.20 -116.59
target 2D structure prediction score : 0.83
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -63.20
2D Compatibility (Sec. Struct. Predict.) : 0.83
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_2M4E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2M4E-query.scw
PDB file : Tito_Scwrl_2M4E.pdb: