Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKR---------P-THQYFSLKDDHAVIQATIWSGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTEEGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAEEIARNIARANQRDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVGHETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEALKKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTKIQRYQDRLGQLDKLLGSQMALVYDAKVAEAKRLSEALLMLDTSRIVARGYAIVKKEESVVDSVESLKKKDQVTLLMRDGQVELEVKDVKTKEI
3DM3 Chain:B ((16-97))-------------------------TATFEGEVISALPIKEFKRADGSIGKLKSFIVRDETGSIRVTLWDNLT---DIDVGRGDYVRVRGYIREGY-YGGLECTANYVEIL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 237 -7373 -31.11 -102.40
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -31.11
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.695

(partial model without unconserved sides chains):
PDB file : Tito_3DM3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DM3-query.scw
PDB file : Tito_Scwrl_3DM3.pdb: