Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKINHLTITQNKDLRDLVSDLTMTIQDGEKVAIIGEEGNGKSTLLKTLMGEDLSDFTIKGDIQSDYQSLAYIPQKVPEDLKKKTLHDYFFLDSIDLDYSILYRLAEELHFDSNRFASDQEIGNLSGGEALKIQLIHELAKPFEILFLDEPSNDLDLETVDWLKGQIQKTRQTVIFISHDEDFLSETADTIVHLRLVKHRKEAETLVEHLDYDSYSEQRKANFAKQSQQAANNQRAYDKTMKKHRRVKQNVETALRATKDSTAGRLLAKKMKTVLSQEKRYEKAAQSMTQKPLEEEQIQLFFSDIQPLPAS-KVLVQLEKENLSIDD--RVLVQKLQLTVRGQEKIGIIGPNGVGKSTLLAKLKQLLNDK-------REISLGFMPQDYHKK----------------L--------------------QLDL-----------------SP---------------IAYISKT--------------GE-K--------------------------EELQKIQSHLASLNFSYP-EMQHQIRSLSGGQQGKLLLLDLVLRKPNFLLLDEPTRNFSPTSQPQIRKLFATYPGGLITVSHDRRFLKEICSIIYRMTEHGLKLVNLEDL
2IW3 Chain:A ((436-978))---LCNCEFSLAYGAKILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIANGQVDG-----FPTQEECRTVYVEHDIDGTHSDTSVLDFVFESGVGT-KEAIKDKLIEFGFTDE--MIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLK------LRKYKGNFTEFVKKCPAAK-------------------AYEELSN---------TDL----------EFK-------------F---PEP-GYL------EGVKTKQKAIVK-VTNMEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHIESHLDKTPSEYIQWRFQTGEDRETMDRANRQINENDAEAMNKIFKIEGTPRRIAGIHSRRKFKNTYEYECSFLLGENIGMKSERWVPMMSVDNAWIPRGELVESHSKMVAEVDMKEALASGQFRPLTRKEIEEHCSMLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVKDGRMTP------


General information:
TITO was launched using:
RESULT:

Template: 2IW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1799 -89695 -49.86 -212.04
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -49.86
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_2IW3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IW3-query.scw
PDB file : Tito_Scwrl_2IW3.pdb: