Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYLKFIKKTKLILMGILIFLSSFNGVLLSGIIVYAGSLNQTSSFSDVLRFGAISILGWSAIYISNYYLEVTEASITKDINVKIKQGYFREQYLFS----EMVKDYSSIISVLSNDLRLIEENYFRQIFEIISSILLFIVSLSFMLYLNFLVSIIFIVLSALPIIVPVFMKKMLSNSANEYSNSNAEYTHIIKEIFNGFKTLKSYSVTKEIISLSDKKLDKLEDSTFNLKRSEVLSKLVAVLISGFCFLVPLVVGCYFVIYHKSLSFSELIGIFLANDKVLGPIQSIAYSLNKINTTKDLRKPFLKYLSGEKNFVDAEHDNNGLYTSSIDEIHMKDVVYSITPENKLSIDFSFKSPF--RVLLTGTSGSGKTTILNLINGSLKPQKGYVNLLS-------HGKKSSDSIPTVDQTPYIFDTTIRENVTLFQNEYFSDDQIIEVLKKVNLYEELEKI-DILNYQCGENGSNLSGGQKQKIALARALIRNNKVYLFDEISANLDNDNSNSIHDILFNL-GI-SFIEVSHHYDLND-KRYTDIYKLENGTLFKIK
5MKK Chain:B ((23-551))-----------YLWAVLAGLVSIFFFVLTPYFLRLAVDAVQAGR--GFGVYALAIVASAALSGLLSYAMRRLAVVASRQVEYDLRRDLL-HHLLTLDRDFYHKHRVGDLMNRLNTDLSAVREMVGPGILMGSRLSFLVLLAFLSMYAVNARLAFYLTLILPGIFLAMRFLLRLIDRRYREAQEVFDRISTLAQEAFSGIRVVKGYALERRMVAWFQDLNRLYVEKSLALARVEGPLHALLGFLMGFAFLTVLWAGGAMVVRGE-LSVGELVQFNAYLAQLTWPILGLGWVMALYQRGLTSLRRLFELLDEKPAIRDEDP-LPLALEDLSGEVRFEGVGLKRDG-RWLLRGLTLTIPEGMTLGITGRTGSGKSLLAALVPRLLDPSEGR-VYVGGHEARRIPLAVLRKAVGVAPQEPFLFSETILENIAFGLD-EVDRERVEWAARLAGIHEEILAFPKGYETVLGERGITLSGGQRQRVALARALAKRPKILILDDALSAVDAETEARILQGLKTVLGKQTTLLISHRTA--ALRHADWIIVLDGGRIVE--


General information:
TITO was launched using:
RESULT:

Template: 5MKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2100 -97707 -46.53 -190.83
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -46.53
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_5MKK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MKK-query.scw
PDB file : Tito_Scwrl_5MKK.pdb: