Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKVLLGFMGAGKSTIARGLD----PNYLDMDALIEKRL-GMSIANFFAEKGEAAFRQVESEVLADLLQ--TDQVVSTGGGVVISQRNRDLLKTNTDNIYLKADFETLYLRIVADKDNQRPLFLNN----SKEELVAIFQERQAWYEEVASRVLD------------VTKLSPEEIIEELR
3NWJ Chain:B ((99-281))RSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMH-KGISIWLDVPLEALAHRI--------------TYTAALNRLSTIWDARGEAYTK-ASARVSLENITLKLGYRSVSDLTPAEIAIEAF


General information:
TITO was launched using:
RESULT:

Template: 3NWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 614 -20759 -33.81 -146.19
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -33.81
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.597

(partial model without unconserved sides chains):
PDB file : Tito_3NWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NWJ-query.scw
PDB file : Tito_Scwrl_3NWJ.pdb: