Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMKTTFSYPKWAEIPNIDLYLDQVLLYVNQVCAPISPNKDKGLTASMVNNYVKNGYLTKPD-----KKKYQRQQIARLIAITTLKSV-FSIQEIAQTLNTLQTQASSDQLYDAFVDYMNQGIDPANPIIQTSCQTVKLYHQTLDLIDHTQEEVIQ
5GPE Chain:G ((10-73))----------------------------------------KADCLVQTVRFYESEGLLPEPARSEGNFRLYDEVHLQRLLFIRRCRAKDMTLDEIRQLLNLRDR----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 141 -9016 -63.94 -155.44
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain G : 0.59

3D Compatibility (PKB) : -63.94
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.703

(partial model without unconserved sides chains):
PDB file : Tito_5GPE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GPE-query.scw
PDB file : Tito_Scwrl_5GPE.pdb: