Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTETIKLMKAHTSVRRFKEQEIPQVDLNEILTAAQMASSWKNFQSYSVIVVRSQEKKDALYELV-PQEAIRQSAVFLLFVGDLNRAEKGARLHT-DTF-QPQGVEGLLISSVDAALAGQNALLAAESLGYGGVIIGLVRYKSEEVAELFNLPDYTYPVFGMALGVPNQTHDVKPRLPLDNVVFEEEYQEQS--TEAIQAYDRVQADYAGARAT----TSWSQRLAEQFGQAEPSSTRKNLEQKKLL
1ZCH Chain:A ((1-245))MNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELAGGQPWIDQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPKYVFPLSGLVIGHPADRSAKKPRLPQEAVNHQETYLNQDELTSHIQAYDEQMSEYMNKRTNGKETRNWSQSIASYYERLYYPHIREMLEKQGF-


General information:
TITO was launched using:
RESULT:

Template: 1ZCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 964 -42252 -43.83 -179.03
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -43.83
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_1ZCH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZCH-query.scw
PDB file : Tito_Scwrl_1ZCH.pdb: