Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDGHLLAHHIRLLNGRIFQKLLSQDPEALYRGEQGKILAVLWNSETGCATATDIALATGLANNTLTTMIKKLEEQKLVIVSPCGKDKRKKYLVLTELGKSQKEVGHRVSQKLDTIFYKGFSEEEIHQFEGFQERILANLKEKGNEV
4LLN Chain:J ((4-139))-FTYSYLFRMISHEMKQKADQKLEQFD---ITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSL-------


General information:
TITO was launched using:
RESULT:

Template: 4LLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 366 -45780 -125.08 -336.62
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain J : 0.70

3D Compatibility (PKB) : -125.08
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_4LLN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LLN-query.scw
PDB file : Tito_Scwrl_4LLN.pdb: