Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYTKNEEELQALGERLGHLLAKNDVLILTGELGAGKTTFTKGLAKGLQISQMIKSPTYTIVREYEGRLPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILKEADGRRLNFQAKGLRAEKLLEELQYGV
3A4N Chain:B ((6-44))------------------------LIILTGLPGVGKSTFSKNLAKILS---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3A4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 21 -4071 -193.83 -169.60
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -193.83
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.907

(partial model without unconserved sides chains):
PDB file : Tito_3A4N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A4N-query.scw
PDB file : Tito_Scwrl_3A4N.pdb: