Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDKIGLFTGSFDPMTNGHLDIIERASRLFDKLYVGIFFNPHKQGFLPIENRKRGLEKALGHLENVEVVASHDELVVDVAKRLGATCLVRGLRNASDLQYEASFDYYNHQLSSDIETIYLHSRPEHLYISSSGVRELLKFGQDIACYVPESILEEIRNEKKD
4F3R Chain:B ((4-158))-MKPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPT------LKLEERVNLIADVLTD-ERVEVLPL-TGLLVDFAKTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGGDVSPFVPPLVARHLQK----


General information:
TITO was launched using:
RESULT:

Template: 4F3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 681 -112999 -165.93 -758.38
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -165.93
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_4F3R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F3R-query.scw
PDB file : Tito_Scwrl_4F3R.pdb: