Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKYSIRGENLEVTEAIRDYVVSKLEKIEKYFQPEQELDARINLKVYREKTAKVEVTIPLGSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQLFTDALVEDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIYVDVEDQTTNVIYRREDGEIGLLEVKES
3LYV Chain:A ((2-58))---------------------------------------------------------------------------------------------------------------------------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRREDGNLGLIEAK--


General information:
TITO was launched using:
RESULT:

Template: 3LYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 157 -23631 -150.52 -414.58
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -150.52
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.710

(partial model without unconserved sides chains):
PDB file : Tito_3LYV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LYV-query.scw
PDB file : Tito_Scwrl_3LYV.pdb: