Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEANMKHLKTFYKKWFQLLVVIVISFFSGALGSFSITQLTQKSSVNNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSANRQNSVFGNDDTDTDSQRISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISSE--KVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIP------SNVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKSSGDLES
5T69 Chain:A ((27-361))------------------------------------------------------------SESFVAAAVSRSGPAVVRIDTE-----------------------QGSGFIIDN---SGIILTNAHVVDGASKVVVTLRDGRTFDGQVRGTDEVTDLAVVKIEPQGSAL-PVAPLGTSSNLQVGDWAIAVGNPVGL--DNTVTLGIISTLG--------------VEFIQTDAAINPGNAGGPLLNARGEVIGINTAI---------TGIGFAIPIDQAKAIQNTLAAGGTVPHPYIGVQMMNITVDQA---QQNNRNPNSPFIIPEVDGILVMRVLPGTPAERAGIRRGDVIVAVDGTPISDGARLQRIVEQAGLNKALKLDLLR--RRLSLTVQTAQ-------


General information:
TITO was launched using:
RESULT:

Template: 5T69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1518 -44265 -29.16 -162.14
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -29.16
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_5T69.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T69-query.scw
PDB file : Tito_Scwrl_5T69.pdb: