Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQVDIAALSPQVVWQHFQTLCTIPRPSKHEQQLREFLQNWAESRNLETYVDEVGNLIIRKNATPGKKHVSGVILQGHLDMVTQANTGTVHDFFKDPIRPVLEEGWLIAKDTTLGADNGIGVALALAVLDSNDI-HGPIEVLLTVDEEAGMSGARLLETGVLKGKWLFNIDTEEWGELYLGCAGSIDVEVEQPLNYEPIPENLNIVNIQVAGLKGGHSGVDIHLGRGNANVILARFLNQHLASLGGHLVEFTGGTARNALPREAVATIAISPNQLSSLEKLLAEYQAAWKEQLKGIDDNLQLSIQ--STGAKVTEVINQQQQNEWLQALATSPYGVASMSQVLPDVVETSNNIGVVRLNREGGKAILMVRSMVNQEAQDFAEKIQAHFSQFNIGSTLTPLVSGWTPNPDSAALKCLQQAYQNAFNIEPNLKVIHAGLECGIIAEHYPHLQMVSFGPDIQGAHAPGERVKVDTVEKCWKLLVTALASVE
3MRU Chain:A ((7-486))----EISTLSPAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLASKEIKHGPIEVLLTIDEEAGMTGAFGLEAGWLKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQELDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQR---FIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFSGAYPGWKPDADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEAI-


General information:
TITO was launched using:
RESULT:

Template: 3MRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2756 -71152 -25.82 -149.17
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -25.82
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_3MRU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MRU-query.scw
PDB file : Tito_Scwrl_3MRU.pdb: