Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQDTPLIIGSRSFQSRLLVGTGKYKDLNETDLAIQASGAEIVTVAIRRVNIGQNPDQPNLLSVIPPEKYTILPNTAGCFDADSAVRTCMLARALLDGHNLVKLEVLGDEKTLYPNVTETLKAARTLIDDGFEIMVYTSDDPIIAQELESMGCVAIMPLGSLIGSGLGILNPHTISIIKENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAAAQNPILMASAMKKAVEAGREAFLAGRMPRKRMANASSPETGYFFK
1WV2 Chain:A ((1009-1251))---TPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTN-------------IPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRK---------------


General information:
TITO was launched using:
RESULT:

Template: 1WV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1335 -179951 -134.79 -782.40
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.89

3D Compatibility (PKB) : -134.79
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_1WV2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WV2-query.scw
PDB file : Tito_Scwrl_1WV2.pdb: