Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRNNSQNLIMLKHDFASHIEDLKCATKPRSEALGRHLWTCTI--DADFYWLKFHLPNVHAQSEQDFLHELQFYEDITYKKANWLLPFKIIEGRTISQQTQFQGKVLV--LPDTECWFDDLDQ---KQNLKNINEKIYLALVKLAELHELGWIHGDIKKEHFRKF---KQELYLIDFEKTRLISSP--DPITDATPRYMAPELFHGANKTVQSDLYALGIVLYEWLTQTRLQANSYHEWAVLHCQKLN----VELPSS-FQIFLPLLSGLLQKQQQNRFSNVHEAINCLKALST
1TKI Chain:B ((21-274))--------------------YEKYMIAEDLGRGEFGI-VHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARH--RNILHLHESFES--------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT-ASEALQ-------


General information:
TITO was launched using:
RESULT:

Template: 1TKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1012 -36495 -36.06 -153.99
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -36.06
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.376

(partial model without unconserved sides chains):
PDB file : Tito_1TKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TKI-query.scw
PDB file : Tito_Scwrl_1TKI.pdb: