Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTFVDAARSFRTQFDLNFSEKIIVDFFAGGGGASTGLEMGLNR-PVYVAVNHNPKAISMHEANHPHAKHYIQDVFAVDP------------IDICDGHQVGWFHASPDCTHHSQAAGGQPR--KKEIRDLSWVVLKFAGKVKPDVISLENVKQILGWGPLIAKRDKATGRVITLDKININGKKVNRIAEPGERVPRHNQFLVPNPKKKGKTWKHFVRSLEQLGYEVEWQKNIIAADFGAPTKRERLFLIARCDGQPI-VWPEKYFSKKPK---------------------GNLKKWRSTVECVDFSDLGNSIFDRPQGPLADATLKRIAKGIQKYVIETKEPFFVNSSTPFIGRDFRTSFGHDIREPLATTTAGYGG------HSSLISPILVPFITEFANASQQRNWSIDEPLSTICAQVKGGHHGLVTA---------------------------------------------------KLSKDNYKGALRVAAFLINYYGNGDARSITEPMDTITTKDRLVLVTVWIKGEPWAIVDICIRMLKPRELFRAQGVPDSYVIEYGSDGKPLSKKDQVFMVGNSVSPYPMAAIARANNPFITQQIKGAA
3PT9 Chain:A ((409-871))-----------------KLPKLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRR-------------------------------------------------SMVLKLTLRCLVRMGYQCTFGV-LQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPE-IQNGAS-NSEI-----------------------------------------PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPL---------VAARMRHIPLFPG------SDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTGNRHNHWAGLYG---RLEWDGFFSTTVTNPE-----PMGK-QGRVLHPEQHRVVSVRECARSQGFPDSYRFF------GN-ILDRHRQVGNAVPPPLAKAIGLEIKLCLLS------


General information:
TITO was launched using:
RESULT:

Template: 3PT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1617 -2510 -1.55 -6.80
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -1.55
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_3PT9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PT9-query.scw
PDB file : Tito_Scwrl_3PT9.pdb: