Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNYYQHHIGDFN-----NATRHLSLIERAIYRDL-LDMYYDTEKAIDASSIDRLARRLQCTTEEQKEALKYVLDEFFILEEGVYRNNRCEREIAEY-HGKKKQASEAGKASAAKRAAKKKGSSNSGSSKDDQSSNENLTVVENPLNEEQTGVQPTNNHKPRTKNQEPRTNY-------------------------------------------
4ZFV Chain:A ((10-445))NVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQPIKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDAIASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAAGRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYYDFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVDQELVDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVDHYRRYAPSQE---------IDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVPAGAKEAITFAWQGMEALV------GRSIPV--------PTRVETRQHYVLGKVS--PGLNYRSVMKKGMAFGGDAQQLPWVSEMIVKKKGKVITNNWAGSHHHH


General information:
TITO was launched using:
RESULT:

Template: 4ZFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 574 41523 72.34 298.73
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 72.34
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.255

(partial model without unconserved sides chains):
PDB file : Tito_4ZFV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZFV-query.scw
PDB file : Tito_Scwrl_4ZFV.pdb: