Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCEFISEYSEFQYDFISLAQQRFVSVPEIDLRTMIQNFGDWYFANESSSLN-TPSIWLVKWFSWVQNNEKQ-----VAANRKKQEQITSTCQKPQESGYFANLFEEQSESQIVDVTPAKKFPMIEEVGHA
2PBX Chain:A ((73-152))----VRQYSNFLTDHIDL---------DLDVKTNLQTL-----CKEMVKLAMTDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLIRNMFMKAMERG--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 165 -4771 -28.91 -64.47
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -28.91
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.303

(partial model without unconserved sides chains):
PDB file : Tito_2PBX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PBX-query.scw
PDB file : Tito_Scwrl_2PBX.pdb: