Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLTKQQRAELKQKFGGHCAYCGDLLG-----------------------------------------DKWHADHIEAVKRDLIHVGGGKLITGEMTRPQN-DTLENMNPACVPCNKNKSSMPLEGWRKLLTHYRDVQLLRDSTHAHHLLRFGLIEIKTKPVTFFFENYKGASHE
5MKW Chain:A ((3-110))-SNNSYLRAKVFETEHGVCQLCNVNAQELFLRLRDAPKSQRKNLLYATWTSKLPLEQLNEMIRNPGEGHFWQVDHIKPVY-----------------GGGGQCSLDNLQTLCTVCHKERTARQAKE-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5MKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 133 8835 66.42 133.86
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 66.42
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_5MKW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MKW-query.scw
PDB file : Tito_Scwrl_5MKW.pdb: