Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKTNIILAVLIGL---IVGGVIGAFGYAKTAAKYDAIS---TACVMMNEAVENNLLTVEQVKTLGEL-------TGTNMKKDYPTVASKFAFSPENLK-NASEASNCSQFIVGFNQSK--------
5ARM Chain:A ((1-130))MHVEAMISKHPQATDRSLVQCVEMCFDCAQTCAACADACLGEDKVADLRHCIRLNLDCAEICVAAGSIASRAAGTEESILRTMLQTCAEMCRMCEEECRRHAGNHEHCRICADVCKECETACRSATG


General information:
TITO was launched using:
RESULT:

Template: 5ARM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 332 -30452 -91.72 -290.02
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -91.72
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_5ARM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ARM-query.scw
PDB file : Tito_Scwrl_5ARM.pdb: