Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MISLSDLRKFKAEGRKFSCLTCYDASMAKAMELAEIDTILIGDSLGMAIQGRDSTLPVTVEDMAYHTAAVRRGNQHALIMTDLPFMSYATLKDALQNAKTVMQAGAQMIKIEGGAWLSETVQVLTRNGVPVCVHLGLTPQSVHVFGGYKLQARTREAADQLIADCTAVVEAGAAVLLLECVPAQLGQEIAELFPNTPVIGIGAGNATDGQVLVVQDMLGLTFGRVARFVRNFMKEQSGETAILDAFKAFHAAVQDQSFPAKEHTFQVEL 1M3U Chain:D ((5-264)) --TISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEALA-IPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAE-TGD--IRAAVRQYMAEVESGVYPGEEHSFH---

General information: TITO was launched using: RESULT: Template: 1M3U.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1532 -217605 -142.04 -836.94 target 2D structure prediction score : 0.68 Monomeric hydrophicity matching model chain D : 0.90 3D Compatibility (PKB) : -142.04 2D Compatibility (Sec. Struct. Predict.) : 0.68 1D Compatibility (Hydrophobicity) : 0.90 QMean score : 0.590

(partial model without unconserved sides chains): PDB file : Tito_1M3U.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1M3U-query.scw PDB file : Tito_Scwrl_1M3U.pdb: