Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSIIQMDLEINQAYAGFGFFDIYHRDSFKQPARTTWIDGWKIEYMAIADPQTIHKTPIVIVGGAFQNFNSYKYCVEQLFESGPVILIDLPSMGANQQITNRNTGISAGTLELPDLSEMLGRWLDIVGIQKVSVMGMSLGSVIASCFAYHRPDLMDRMILMGVMQKTRKSWRMILEESLKLMQENRMEEFGQAVILYLVNHAKLDKMRMSPTAKKLFFRQMAEFTGTERERYEINCNRLLRLTDVPIPECKTLIAAGQYDSFTLPHENANFALQCPDMEFALIANADHVPQLQRRKETMSLFTSFLKGESIQNLDGIIPMTREQMQNMERRGEERIPVLQPKTKLSHRECETEVPVTIVDVTFFGMYLKLDDVAQLEFVNEHPRDLALHLEDDEGAFSIECLIFEATEQGVRALFKHGSFELADRLSRFIARQKQAA
1AZW Chain:A ((1-313))-------------------MRTLYPEITPYQQGSLKVDDRHTLYFEQCGNPH---GKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVD------NTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLN---------------AIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSF------LHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIA-------------------------------------------------DIPGVIVHGRY-------DVVCPLQSAWDLHKAWP------------KAQLQISPASGHSAFEPENVDALVRATDGFA-------


General information:
TITO was launched using:
RESULT:

Template: 1AZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1840 -170663 -92.75 -545.25
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -92.75
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_1AZW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AZW-query.scw
PDB file : Tito_Scwrl_1AZW.pdb: