Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILFGKKKVKPSQKAYAVVTGAGSGIGRSFAIELAKRGGSVVCADINLEAAEETVTLLEQQGAKAFAMHCDVGDPEHVTNLAETAEILLSHPVTLVINNAGVGLGGKFDELSLEDWNWVMNINLWGVIHGCHAFVPKFKKLGYGA-IINVASAASYTAAPEMTAYNVTKAGVRALSETLSAELRKFNIKV--NVLCPTLVPTNI----------IKNGRIPGRYSKLADHALMNYALT---TSDDVAKLTLNRLDQDELYTIPQIDAKLFWLMKRASPSLYTKFLGTSYKLFK
5IG2 Chain:B ((17-261))----------------AVITGAGSGFGRAFAEKGASLGMKLVLADVDEGALARTVDTLRAAGAEVIGVRTDVSNGAQVQALADAALEAFGK-VHLLFNNAGVGAGGFLWESSANDWAWVFGVNVMGVAHGVRVFAPIMLGQNEAAHIVNTASVAGLLSPPSMGIYNASKHAVVSLTETLYHDLRNAGGEVGCSLLCPAFVPTGIADAERVRPEALRNEAQPTRSQLAADRQLQRAVRSGKLGATDVATLTFEAIAERRFYIL-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1258 -90987 -72.33 -397.32
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -72.33
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_5IG2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IG2-query.scw
PDB file : Tito_Scwrl_5IG2.pdb: