Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKGSFMPASTSQYYTRTAQILHWVMAIIFITAWVIGFYSGNFL-SYD-----------VDGSFKGDVITLHKNIATTIIFLVVIRLFWRYTHPAPQLPDTMSPTMKTLAHIGHLLLYVILVALPVTGCLFSWSAGHPA------PVLYLFEIPRL-----------VQDNPELLAIVKPLH-IYISWFAGFLIVGHVLAALKHHFVDKDNVLNSMTKQPK
4H13 Chain:A ((39-207))-------------------------ITLTCFLIQFATGFAMTFYYKPTVTEAYASVQYIMNEVSFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRE-------LTWISGVILAVITVSFGVTGYSLPWDQVGYWAVKIVSGVPE--AIPVVGVLISDLLRGGSSVGQATLTRYYSAHTFVLPWLIAVFMLLHFLMIR-------------------


General information:
TITO was launched using:
RESULT:

Template: 4H13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 367 -54903 -149.60 -394.99
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -149.60
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.192

(partial model without unconserved sides chains):
PDB file : Tito_4H13.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H13-query.scw
PDB file : Tito_Scwrl_4H13.pdb: