Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHTAVANVKLNWTYFCLILASTFLQGSSFVATKILLSSMSPLWVATIRFFIAALSLLPLIIYRYFKNPISLFNIPWLKLFVIGLFQTAGVMAFLNIGLGYTSPSTAAILMASNPLLVVILAMLILGERISIRALVGLIVAFIGVVICIGLGNTN---SGGIGRGEVLVILASSCWAIATIINKKFNLHLDPWVITFWQMLLGSLVLFLVALFSQQPFTLPTTESMWLTFLWLAIPASTGAMGLWFAALKIGGAIHTSGFLFLCPLFSAIITYFVLGTVLTSQELIGGFLIGTGIYVLSRYR
5I20 Chain:E ((2-284))----------SRSSATLIGFTAILLWSTLALATS-STGAVPPFLLTALTFTIGGAVGIAAGLARGV-G-LSVLRQPWP-VWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAYLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFAR-VPTEVVAGFCLATAALSALCHILFEP-S--VWPVGSEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGALAIACALIVGGAAVATLL-


General information:
TITO was launched using:
RESULT:

Template: 5I20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1386 -251941 -181.78 -899.79
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain E : 0.74

3D Compatibility (PKB) : -181.78
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_5I20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I20-query.scw
PDB file : Tito_Scwrl_5I20.pdb: