Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------MLKQLKEDIQAVFARDPAARNTLEVLTTYPGIHALLLHRLAHELWKKDCKGTARFVSSFSRFATGIEIHPGAKIGKRFFIDHGMGVVIGETAEIGDDVTLYHGVTLGGTTWNKGKRHPTLEDGVVVGAGAKILGPFTVGKGAKVGSNAVVTKAVPAGVTAVGNPARYIYKDADKTKDKDEERRRDYAQSIGFAPYATTADQSDPILEGMRVLLDRVQHNETRMNNLCQRLSELDPTFKKESQDEQPFSDEELKILEEIRRECGAQNKTSKT
3F1X Chain:A ((2-300))TTFNYTNILTQAVDELSESQSYKGLFHQHKDGDPLPSAKSLYKIVELARAIIFPGYFGNSTVNSHTINYHIGVNVETLFGLLTEQILAGLCFGDNEPCRETASLLAARFISKLPELRRILATDVEAAYYGDPAATCFGEIISCYPAIRAISNYRIAHELLILGVPLIPRFITEMAHSETGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGA-----KPRHPILEDDVIVYSNATILGRVTIGKGATVGGNIWVTENVPAGSRIVQRKNK---------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3F1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 421 802 1.90 4.98
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 1.90
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.689

(partial model without unconserved sides chains):
PDB file : Tito_3F1X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F1X-query.scw
PDB file : Tito_Scwrl_3F1X.pdb: