Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKLVLGGLSAAIMAVSGSVMAADFVAGKDYTVIANPGKVEVPGKIEVREFFWYGCLHCFKLEPHMQTWLKQIPSDVRFVRTPAAMNKVWEQGARTYYTSEALGVRKRTHLPLFHAIQVNGQQIFDQASAAKFFTRYGVPEQKFNSTYNSFAVTAKVAESNKLAQQYQLTGVPAVVVNGKYVVQGEDGKVTQVLNYLIEKERKAK
4P3Y Chain:B ((3-181))-------------------------AAGKDYTVIANPGKVEVPGKIEVREFFWYGCPHCFKLEPHMQTWLKQIPSDVRFVRTPAAMNKVWEQGARTYYTSEALGVRKRTHLPLFHAIQVNGQQIFDQASAAKFFTRYGVPEQKFNSTYNSFAVTAKVAESNKLAQQYQLTGVPAVVVNGKYVVQGEDGKVTQVLNYLIEKERKA-


General information:
TITO was launched using:
RESULT:

Template: 4P3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 807 -87582 -108.53 -489.28
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.91

3D Compatibility (PKB) : -108.53
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_4P3Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P3Y-query.scw
PDB file : Tito_Scwrl_4P3Y.pdb: