Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEFLISTSIVALAEMGDKTQLLALLLSACFRKPIPILIAILLATLINHGISAVLGQWITTVLSPAILVWVLAVGFIGMAFWMLIPDELDDETASINKWQKFGVFGATFILFFLAEIGDKTQIATVALAARYDSIFWVMLGTTLGMMIANAPAVFIGNKLAERLSIALIHKIGAAIFFIVGVSTLVQHYFF
1PW4 Chain:A ((82-109))-----------------------------------------------------------------------------------------------------------------------------------------------------------IMGSVSDRSNPRVFL---------------------


General information:
TITO was launched using:
RESULT:

Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 10 -1451 -145.10 -96.73
target 2D structure prediction score : 0.00
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : -145.10
2D Compatibility (Sec. Struct. Predict.) : 0.00
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.831

(partial model without unconserved sides chains):
PDB file : Tito_1PW4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PW4-query.scw
PDB file : Tito_Scwrl_1PW4.pdb: