Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAYKAPLHDIRFLMNEVLDYPAHYKTLSNGESADPDTVDMILEGAADYCENVLSPLNQSGDEEGCHFDNGEVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLPMSLNLIKSEMMGTANWSFTMYPGLSSG-CMNTILQFGTDEQKQTYMPKLVEGTWSGTMCLTEPQCGTDLGQVKTKAEPQA-DGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAP----AGTRGISLFIVPKFIPTAEGGVGERNTVSCGSIEHKMGIRASATAVLNFDN---ATGYLIGEVNKGLHAMFTFMNTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGK--------------VVREYTAEILKFCA---AHAR--NKYLRRFAWDLTKLCAQWNTLTVRIMLAARK-------DRDIVSSASVDFLMFSGYVMMAYFWAQQAVVASEKLEAGNGQETPEFYKAKIKVADFYFDRLLPRAQGHAESMVTTSRTLTSLPAEHFSFDY
2UXW Chain:A ((53-577))-------------------------------------FLKELVEPVSRFFEEVNDPAKN--DALEMV--------E---ETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGL--AD--IFTVFAKTPVTDPATGAVKEKITAFVVERGFG----------GITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFG------------EKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGAT---------------DFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLF-VALQGCM-DKGKELSGLGSALKNPFG--------------SGLSLSGLVHPELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVV------VLS----RASRSLSEG-----HPTAQHEKMLCDTWCIEAAARIREGMAALQSDP---------------


General information:
TITO was launched using:
RESULT:

Template: 2UXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2416 -42205 -17.47 -89.80
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -17.47
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_2UXW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2UXW-query.scw
PDB file : Tito_Scwrl_2UXW.pdb: