Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQTETMLDVADNSGARRVQCIKVLGGSHRRYASVGDIIKVTVKEAIPRARVKKGDVMNAVVVRTKFGIRRPDGSVIRFDDNAAVILNNN-KAPIATRIFGPVTRELRIEQFMKIISLAPEVL
5GAH Chain:L ((1-123))MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL


General information:
TITO was launched using:
RESULT:

Template: 5GAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 635 -74074 -116.65 -607.16
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain L : 0.96

3D Compatibility (PKB) : -116.65
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_5GAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAH-query.scw
PDB file : Tito_Scwrl_5GAH.pdb: