Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPNCYAIHFYLECFMRKSLIWINLIIAMGALGFTNVVNAKDEYPLHMAAANDDIQLIKHILSQKTLIDARDETGSTALMVATRANNIHAAHMLIEAGADVNAKDNIQDSPYLYAGAQGYLKILRMTLMHGADLKSTNRYGGTALIPAAERGHVETVRTLIAAGVNINHVNNLGWTALLEAIILGNGKSNYQQIVALLLKAGANPNLADKDGITPLQHARTRGYREIEKLLLVAGAK
5D66 Chain:B ((3-198))----------------------------------------DEYPLHMAAANDDIQLIKHILSQKTLIDARDETGSTALMVATRANNIHAAHMLIEAGADVNAKDNIQDSPYLYAGAQGYLKILRMTLMHGADLKSTNRYGGTALIPAAERGHVETVRTLIAAGVNVNHVNNLGWTALLEAIILGNGKSNYQQIVALLLKAGANPNLADKDGITPLQHARTRGYREIEKLLLVAGAK


General information:
TITO was launched using:
RESULT:

Template: 5D66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1113 -102342 -91.95 -522.15
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.89

3D Compatibility (PKB) : -91.95
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.674

(partial model without unconserved sides chains):
PDB file : Tito_5D66.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D66-query.scw
PDB file : Tito_Scwrl_5D66.pdb: