Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSERWWQDSSVTAELFQRPKSFEFIQATRLLRHMPANDAALSWCDHFKFETSFNLNFPATEIESLELVDERVHLTNLIVGLTGIQGTLPYTYTNKIKQAPRQQRAETKEFLSLFNHKLTSQYVESSITYHLPVRYEIENKNDYLDILHALNGYVRSQHQQQDLDEYFAEFSGLMQGQNNTVHALKTMLSCIFKHEITIKEFVQESFKLAGDQLTTLGGSQPSLLGINTFCGETIQQIDGKIEIQIGPLKHQQYLRFLPHQELSLKLKKIVETWCSPTLSIDLRLILDESEIQPVRLTQGQEGGLGQGAFLMSRKPNTHNDETCYSLIGEQI
2LC0 Chain:A ((56-93))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLAPNEYIITLGVHDFEKLGADPE--LKSTGFARDLADYI---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2LC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 43 -7415 -172.43 -195.12
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -172.43
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.758

(partial model without unconserved sides chains):
PDB file : Tito_2LC0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LC0-query.scw
PDB file : Tito_Scwrl_2LC0.pdb: