Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARNADYIDI-AGFTIAPQTLLPYGHLYNASLAGNQLNSAHGFAGPILAAPIWLINKP-ERFFAIAPYLYVPIGTYHSDEALNIDENRWKFDLQLGVFNNVAMIFLPKSRPMLFDMVHMMILLE
4RL8 Chain:C ((52-151))--RLLHVYQLTDRLTLEPQFLLPFGRVSSSGD-ASALGDTSGVGDLTLTAPLKYRLNEANDILGATVYLTAPTGNYNRDDALNLGENRWKVDLQAAYVKHLGE---------------------


General information:
TITO was launched using:
RESULT:

Template: 4RL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 353 -18168 -51.47 -185.38
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain C : 0.71

3D Compatibility (PKB) : -51.47
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_4RL8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RL8-query.scw
PDB file : Tito_Scwrl_4RL8.pdb: