Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGENAKELVEISQFLLARTN
4F62 Chain:A ((13-292))---------------QSRVDQYLEQQLSDYAPANQLHNAMRYSLF-GGKRIRPMLTYASAQLVGDIS-SLTDASAAALESIHAYSLIHDDLPAMDN-------PTCHIQFDEATAILAGDALQTFAFELLS----NPTSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLT----------------NKATYPKLLGLDGAKALVVRLHEQAIAQISEFGDKSQPLTDLANYIID---


General information:
TITO was launched using:
RESULT:

Template: 4F62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1251 -135941 -108.67 -531.02
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -108.67
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_4F62.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F62-query.scw
PDB file : Tito_Scwrl_4F62.pdb: