Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALKDRLKDSRIKAKKTQAEVAEAVKMSQPAYQALESGKNLKSAFLPLIAQFLGVDAYWLTTGNSEDSFRESDVFSPTVVNNDAADQYVWIEVVEASFSCGTGESIEFHFDAINGKIPFPASFFKEKRVAQECMRIIKAKGDGMTDYIKDGDLVGIDISQTEVIDGEIYAFYFAGEGMIKQIFKEADGSLILHSLNEKFRDRRVTEENGKNFKVMGRQFWRAG
1PRA Chain:A ((2-69))--ISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGTSDSNVR---------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1PRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 214 -19147 -89.47 -281.57
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -89.47
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.735

(partial model without unconserved sides chains):
PDB file : Tito_1PRA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PRA-query.scw
PDB file : Tito_Scwrl_1PRA.pdb: