Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVIDALRKRRAVKRFDPAFQLSENDKKQLLQEVLANAPSAFNLQHWRPVIVEDAELRQKIRAIA-WDQPQVTESSLLIVLCAKVNTWEVDAKRVWD-----GASP-EVQDIMVGAIDQYYRDRPQTQ-RDEVMRSAGIFAQTLMLLAQEHGLDSCPMDGFDFDAMAKLINLPED-HVVCLMIAVGKSASEPYLRVGKLPYDDVIIQNTF
3GE6 Chain:A ((14-208))------VKGRRSIRNYDTNVKISKEEMTQILEEATL-APSSVNMQPWRFLVIDSEEGKATLAPLAKFNQVQVETSSAVIAVFGDMKAID-QLENIYDTAVEKGLMPQEVRDRQVPAIQGMYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGMEKDRYVPVMLLSIGKAVDAGYPSV-RLPINDI------


General information:
TITO was launched using:
RESULT:

Template: 3GE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 821 -28628 -34.87 -153.91
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -34.87
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_3GE6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GE6-query.scw
PDB file : Tito_Scwrl_3GE6.pdb: