Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIVADENLAFTDYFFSEFGDIQHKAGRTLTHTDVQDAEALLVRSVTAVNESLIQNTALKYVGSATIGTDHLDIQALEKQGITWANAAGCNAQAVAEYVITALLHLDASLLEQQEKFTLGIVGLGNVGKRLAYMAQLLGWKVIGFDPFVQLD--SIENVSFQTLLQQANAVSIHVPLTKKGEHATYHLFDEKAFAALQPNTILINSARGPVVKEAALIEDIQC-TQRKVVLDVFEHEPVISEGLLNMLALATPHIAGYSLEGKARGTQMIYEAFCQKFGYD-INKRFETQLPACED-Y--FSGHDLKAVLKQKLSQIYDIAQYDANIRACVKEGKVEQKAFDLLRKNYPLRREWAAHGGPQA
3OET Chain:E ((4-359))MKILVDENMPYARELFSRLGEVKAVPGRPIPVEELNHADALMVRSVTKVNESLLSGTPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQR-VALETLLPAPEFGRITLHGPLDQPTLKRLAHLVYDVRRDDAPLRKVAG----IPGEFDKLRKNYLERREWSSLYVMC-


General information:
TITO was launched using:
RESULT:

Template: 3OET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1835 -130041 -70.87 -372.61
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain E : 0.79

3D Compatibility (PKB) : -70.87
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3OET.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OET-query.scw
PDB file : Tito_Scwrl_3OET.pdb: