Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMMMKSIKHLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYEAVPPLLK
4G4V Chain:A ((5-114))--------------------------------------------------------------------------ALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYE-------


General information:
TITO was launched using:
RESULT:

Template: 4G4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 491 -13464 -27.42 -122.40
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -27.42
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.651

(partial model without unconserved sides chains):
PDB file : Tito_4G4V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G4V-query.scw
PDB file : Tito_Scwrl_4G4V.pdb: