Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQRSGRFERIKKPLKSDMNVVPYIDVMLVLLVIFMVTAPMITSGIKVDLPQAN-NHPIESKDMP-AMVTIGKDGNIYLQYEDYKDNEPLSLEKL--ESVLSEAQKKAEQENKQLTVLVNGDKTRPYGEVVSLMASLQEAGLTQVGLLTEPLK
5BY4 Chain:A ((5-109))----------------------------------------PIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVE--KDR----LERLPPEQVVAEVSSRF-KANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQP--


General information:
TITO was launched using:
RESULT:

Template: 5BY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 374 8645 23.11 85.59
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 23.11
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.710

(partial model without unconserved sides chains):
PDB file : Tito_5BY4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BY4-query.scw
PDB file : Tito_Scwrl_5BY4.pdb: